David van Dijk

Website:

Van Dijk Lab
Assistant Professor of Medicine and Computer Science
Office Address:
300 George Street
New Haven, CT 06511
Mailing Address:
P.O. Box 208005
New Haven 06520
Phone: (203) 737-4533
Email: david.vandijk@yale.edu
Degrees:
  • Ph.D., University of Amsterdam & Weizmann Institute of Science

Interests:

The mission of our lab is to provide machine learning tools that extract meaningful insight from high-throughput, high-dimensional biomedical data. We work with data such as: Single-Cell RNA sequencing, Gut microbiome sequencing, Biomedical imaging, and Electronic Health Records. We are part of Internal Medicine (Cardiology) as well as Computer Science.

Selected Publications:

  • David van Dijk, et al. "Recovering Gene Interactions from Single-Cell Data Using Data Diffusion." Cell (2018), https://doi.org/10.1016/j.cell.2018.05.061
  • Kevin R. Moon*, David van Dijk*, et al. "Visualizing Structure and Transitions for Biological Data Exploration." Nature Biotech (2019) [in press], bioRxiv 120378; doi: https://doi.org/10.1101/120378
  • Matthew Amodio*, David van Dijk*, et al. "Exploring Single-Cell Data with Deep Multitasking Neural Networks." Nature Methods (2019) [in press], bioRxiv 237065; doi: https://doi.org/10.1101/237065